Index

_

__init__() (medusa.artifact_removal.ArtifactRegression method) (medusa.artifact_removal.ICA method) (medusa.artifact_removal.ICAData method) (medusa.bci.cvep_spellers.BWRFeatureExtraction method) (medusa.bci.cvep_spellers.CircularShiftingAsyncESExtension method) (medusa.bci.cvep_spellers.CircularShiftingClassifier method) (medusa.bci.cvep_spellers.CircularShiftingEarlyStopping method) (medusa.bci.cvep_spellers.CVEPModelCircularShifting method) (medusa.bci.cvep_spellers.CVEPModelTRCAGoldCodes method) (medusa.bci.cvep_spellers.CVEPSpellerData method) (medusa.bci.cvep_spellers.CVEPSpellerDataset method) (medusa.bci.cvep_spellers.CVEPSpellerModel method) (medusa.bci.cvep_spellers.FilterBankPreprocessing method) (medusa.bci.cvep_spellers.GOLD_CODES method) (medusa.bci.cvep_spellers.LFSR method) (medusa.bci.cvep_spellers.StandardPreprocessing method) (medusa.bci.cvep_spellers.TRCAGoldCodesClassifier method) (medusa.bci.erp_spellers.CMDModelEEGInception method) (medusa.bci.erp_spellers.CMDModelEEGNet method) (medusa.bci.erp_spellers.CMDModelRLDA method) (medusa.bci.erp_spellers.CSDModelEEGInception method) (medusa.bci.erp_spellers.ERPSpellerData method) (medusa.bci.erp_spellers.ERPSpellerDataset method) (medusa.bci.erp_spellers.ERPSpellerModel method) (medusa.bci.erp_spellers.StandardFeatureExtraction method) (medusa.bci.erp_spellers.StandardPreprocessing method) (medusa.bci.mi_paradigms.CSPFeatureExtraction method) (medusa.bci.mi_paradigms.MIData method) (medusa.bci.mi_paradigms.MIDataset method) (medusa.bci.mi_paradigms.MIModel method) (medusa.bci.mi_paradigms.MIModelCSP method) (medusa.bci.mi_paradigms.MIModelEEGSym method) (medusa.bci.mi_paradigms.StandardFeatureExtraction method) (medusa.bci.mi_paradigms.StandardPreprocessing method) (medusa.bci.ssvep_spellers.CMDModelCCA method) (medusa.bci.ssvep_spellers.SSVEPCodeGenerator method) (medusa.bci.ssvep_spellers.SSVEPSpellerData method) (medusa.bci.ssvep_spellers.SSVEPSpellerDataset method) (medusa.bci.ssvep_spellers.SSVEPSpellerModel method) (medusa.bci.ssvep_spellers.StandardFeatureExtraction method) (medusa.bci.ssvep_spellers.StandardPreprocessing method) (medusa.classification_utils.EarlyStopping method) (medusa.components.Algorithm method) (medusa.components.ConsistencyChecker method) (medusa.components.CustomBiosignalData method) (medusa.components.CustomExperimentData method) (medusa.components.Dataset method) (medusa.components.Pipeline method) (medusa.components.PipelineConnector method) (medusa.components.ProcessingClassWrapper method) (medusa.components.ProcessingFuncWrapper method) (medusa.components.ProcessingMethod method) (medusa.components.Recording method) (medusa.components.SettingsTreeItem method) (medusa.components.ThreadWithReturnValue method) (medusa.components.TreeDict method) (medusa.ecg.ChannelNotFound method) (medusa.ecg.ECG method) (medusa.ecg.ECGChannelSet method) (medusa.ecg.UnlocatedChannel method) (medusa.emg.EMG method) (medusa.eog.EOG method) (medusa.frequency_filtering.FIRFilter method) (medusa.frequency_filtering.IIRFilter method) (medusa.meeg.meeg.Connecitivity method) (medusa.meeg.meeg.EEG method) (medusa.meeg.meeg.EEGChannelSet method) (medusa.meeg.meeg.MEEGChannel method) (medusa.meeg.meeg.MEG method) (medusa.meeg.meeg.MEGChannelSet method) (medusa.meeg.meeg.UnknownStandardChannel method) (medusa.meeg.meeg_montages.ChannelNotFound method) (medusa.meeg.meeg_montages.UnlocatedChannel method) (medusa.nirs.NIRS method) (medusa.optimization.Grinder method) (medusa.optimization.Optimizer method) (medusa.plots.head_plots.ConnectivityPlot method) (medusa.plots.head_plots.TopographicPlot method) (medusa.plots.mi_plots.MIPlots method) (medusa.pytorch_integration.DeviceNotAvailableError method) (medusa.pytorch_integration.NoGPUError method) (medusa.pytorch_integration.TorchExtrasNotInstalled method) (medusa.pytorch_integration.TorchNotConfiguredError method) (medusa.signal_generators.SignalGenerator method) (medusa.signal_generators.SinusoidalSignalGenerator method) (medusa.spatial_filtering.CCA method) (medusa.spatial_filtering.CSP method) (medusa.spatial_filtering.LaplacianFilter method)

A

add() (medusa.components.Pipeline method) add_bioimaging() (medusa.components.Recording method) add_biosignal() (medusa.components.Recording method) add_channel() (medusa.ecg.ECGChannelSet method) (medusa.meeg.meeg.EEGChannelSet method) add_consistency_rule() (medusa.components.ConsistencyChecker method) add_custom_data() (medusa.components.Recording method) add_experiment_data() (medusa.components.Recording method) add_item() (medusa.components.SettingsTreeItem method) (medusa.components.TreeDict method)

add_method() (medusa.components.Algorithm method) add_pipeline() (medusa.components.Algorithm method) add_recordings() (medusa.components.Dataset method) Algorithm (class in medusa.components) apply_lp() (medusa.spatial_filtering.LaplacianFilter method) ArtifactRegression (class in medusa.artifact_removal) assortativity() (in module medusa.graph_theory.assortativity) autocorr_circular() (in module medusa.bci.cvep_spellers) autocorr_zeropad() (in module medusa.bci.cvep_spellers)

B

band_power() (in module medusa.local_activation.spectral_parameteres) betweenness() (in module medusa.graph_theory.betweeenness_centrality) BiosignalData (class in medusa.components) build() (medusa.bci.cvep_spellers.CMDModelBWREEGInception method) (medusa.bci.cvep_spellers.CMDModelBWRLDA method) (medusa.bci.cvep_spellers.CVEPSpellerModel method) (medusa.bci.erp_spellers.CMDModelEEGInception method) (medusa.bci.erp_spellers.CMDModelEEGNet method) (medusa.bci.erp_spellers.CMDModelRLDA method) (medusa.bci.erp_spellers.CSDModelEEGInception method) (medusa.bci.erp_spellers.ERPSpellerModel method) (medusa.bci.mi_paradigms.MIModel method) (medusa.bci.mi_paradigms.MIModelCSP method) (medusa.bci.mi_paradigms.MIModelEEGSym method) (medusa.bci.ssvep_spellers.CMDModelCCA method) (medusa.bci.ssvep_spellers.SSVEPSpellerModel method)

BWRFeatureExtraction (class in medusa.bci.cvep_spellers)

C

canoncorr() (medusa.spatial_filtering.CCA static method) car() (in module medusa.spatial_filtering) cast_biosignal() (medusa.components.Recording method) cast_experiment() (medusa.components.Recording method) categorical_labels() (in module medusa.classification_utils) CCA (class in medusa.spatial_filtering) central_tendency_measure() (in module medusa.local_activation.nonlinear_parameters) change_channel_set() (medusa.ecg.ECG method) (medusa.meeg.meeg.EEG method) (medusa.meeg.meeg.MEG method) ChannelNotFound, [1] check_channels_labels() (medusa.ecg.ECGChannelSet method) (medusa.meeg.meeg.EEGChannelSet method) check_consistency() (medusa.components.ConsistencyChecker method) check_dimensions() (in module medusa.utils) check_early_stop() (medusa.bci.cvep_spellers.CircularShiftingEarlyStopping method) check_epoch() (medusa.classification_utils.EarlyStopping method) check_epochs_feasibility() (in module medusa.epoching) check_for_non_control_data() (medusa.bci.erp_spellers.ERPSpellerModel static method) (medusa.bci.ssvep_spellers.SSVEPSpellerModel static method) check_gpu_acceleration() (in module medusa.pytorch_integration) check_if_shifted() (in module medusa.bci.cvep_spellers) check_predict_feasibility() (medusa.bci.cvep_spellers.CVEPModelCircularShifting method) (medusa.bci.cvep_spellers.CVEPModelTRCAGoldCodes method) check_predict_feasibility_signal() (medusa.bci.cvep_spellers.BWRFeatureExtraction method) (medusa.bci.cvep_spellers.CMDModelBWREEGInception method) (medusa.bci.cvep_spellers.CMDModelBWRLDA method) (medusa.bci.cvep_spellers.CVEPModelCircularShifting method) (medusa.bci.cvep_spellers.CVEPModelTRCAGoldCodes method) check_pytorch_config() (in module medusa.pytorch_integration) CheckTreeStructure (class in medusa.components) CircularShiftingAsyncESExtension (class in medusa.bci.cvep_spellers) CircularShiftingClassifier (class in medusa.bci.cvep_spellers) CircularShiftingEarlyStopping (class in medusa.bci.cvep_spellers) clear() (medusa.plots.head_plots.ConnectivityPlot method) (medusa.plots.head_plots.TopographicPlot method) clustering_coefficient() (in module medusa.graph_theory.clustering_coefficient) CMDModelBWREEGInception (class in medusa.bci.cvep_spellers) CMDModelBWRLDA (class in medusa.bci.cvep_spellers) CMDModelCCA (class in medusa.bci.ssvep_spellers) CMDModelEEGInception (class in medusa.bci.erp_spellers) CMDModelEEGNet (class in medusa.bci.erp_spellers) CMDModelRLDA (class in medusa.bci.erp_spellers) command_decoding_accuracy() (in module medusa.bci.erp_spellers) (in module medusa.bci.ssvep_spellers)

command_decoding_accuracy_per_cycle() (in module medusa.bci.cvep_spellers) command_decoding_accuracy_per_seq() (in module medusa.bci.erp_spellers) (in module medusa.bci.ssvep_spellers) complexity() (in module medusa.graph_theory.complexity) compute_control_state_labels() (medusa.bci.erp_spellers.ERPSpellerData method) compute_dev_epochs() (in module medusa.plots.erp_plots) compute_dist_matrix() (medusa.meeg.meeg.EEGChannelSet method) compute_erp_labels() (medusa.bci.erp_spellers.ERPSpellerData method) config_pytorch() (in module medusa.pytorch_integration) configure() (medusa.bci.cvep_spellers.CMDModelBWREEGInception method) (medusa.bci.cvep_spellers.CMDModelBWRLDA method) (medusa.bci.cvep_spellers.CVEPSpellerModel method) (medusa.bci.erp_spellers.CMDModelEEGInception method) (medusa.bci.erp_spellers.CMDModelEEGNet method) (medusa.bci.erp_spellers.CMDModelRLDA method) (medusa.bci.erp_spellers.CSDModelEEGInception method) (medusa.bci.erp_spellers.ERPSpellerModel method) (medusa.bci.mi_paradigms.MIModel method) (medusa.bci.mi_paradigms.MIModelCSP method) (medusa.bci.mi_paradigms.MIModelEEGSym method) (medusa.bci.ssvep_spellers.CMDModelCCA method) (medusa.bci.ssvep_spellers.SSVEPSpellerModel method) conn_to() (medusa.components.Pipeline method) Connecitivity (class in medusa.meeg.meeg) ConnectivityPlot (class in medusa.plots.head_plots) ConsistencyChecker (class in medusa.components) control_state_detection_accuracy() (in module medusa.bci.erp_spellers) control_state_detection_accuracy_per_seq() (in module medusa.bci.erp_spellers) count_items() (medusa.components.SettingsTreeItem method) CSDModelEEGInception (class in medusa.bci.erp_spellers) CSP (class in medusa.spatial_filtering) (medusa.bci.mi_paradigms.CSPFeatureExtraction attribute) CSPFeatureExtraction (class in medusa.bci.mi_paradigms) custom_operations_on_recordings() (medusa.bci.cvep_spellers.CVEPSpellerDataset method) (medusa.bci.erp_spellers.ERPSpellerDataset method) (medusa.bci.mi_paradigms.MIDataset method) (medusa.bci.ssvep_spellers.SSVEPSpellerDataset method) (medusa.components.Dataset method) CustomBiosignalData (class in medusa.components) CustomExperimentData (class in medusa.components) CVEPModelCircularShifting (class in medusa.bci.cvep_spellers) CVEPModelTRCAGoldCodes (class in medusa.bci.cvep_spellers) CVEPSpellerData (class in medusa.bci.cvep_spellers) CVEPSpellerDataset (class in medusa.bci.cvep_spellers) CVEPSpellerModel (class in medusa.bci.cvep_spellers)

D

Dataset (class in medusa.components) decode_commands() (in module medusa.bci.erp_spellers) decode_commands_from_events() (in module medusa.bci.cvep_spellers) degree() (in module medusa.graph_theory.degree) density() (in module medusa.graph_theory.density)

detect_control_state() (in module medusa.bci.erp_spellers) (in module medusa.bci.ssvep_spellers) DeviceNotAvailableError display() (medusa.frequency_filtering.FIRFilter method) (medusa.frequency_filtering.IIRFilter method) display_filter() (in module medusa.frequency_filtering)

E

EarlyStopping (class in medusa.classification_utils) ECG (class in medusa.ecg) ECGChannelSet (class in medusa.ecg) EEG (class in medusa.meeg.meeg) EEGChannelSet (class in medusa.meeg.meeg) efficiency() (in module medusa.graph_theory.efficiency) eigen_centrality() (in module medusa.graph_theory.eigen_centrality)

eigenvalues (medusa.spatial_filtering.CSP attribute), [1] EMG (class in medusa.emg) EOG (class in medusa.eog) ERPSpellerData (class in medusa.bci.erp_spellers) ERPSpellerDataset (class in medusa.bci.erp_spellers) ERPSpellerModel (class in medusa.bci.erp_spellers) exec_pipeline() (medusa.components.Algorithm method) ExperimentData (class in medusa.components)

F

factor() (in module medusa.plots.optimal_subplots) FilterBankPreprocessing (class in medusa.bci.cvep_spellers) filters (medusa.spatial_filtering.CSP attribute), [1] FIRFilter (class in medusa.frequency_filtering) fit() (medusa.artifact_removal.ArtifactRegression method) (medusa.artifact_removal.ICA method) (medusa.bci.cvep_spellers.FilterBankPreprocessing method) (medusa.bci.cvep_spellers.StandardPreprocessing method) (medusa.bci.erp_spellers.StandardPreprocessing method) (medusa.bci.mi_paradigms.StandardPreprocessing method) (medusa.bci.ssvep_spellers.StandardPreprocessing method) (medusa.frequency_filtering.FIRFilter method) (medusa.frequency_filtering.IIRFilter method) (medusa.spatial_filtering.CCA method) (medusa.spatial_filtering.CSP method) (medusa.spatial_filtering.TRCA method) fit_dataset() (medusa.bci.cvep_spellers.CircularShiftingClassifier method) (medusa.bci.cvep_spellers.CMDModelBWREEGInception method) (medusa.bci.cvep_spellers.CMDModelBWRLDA method) (medusa.bci.cvep_spellers.CVEPModelCircularShifting method) (medusa.bci.cvep_spellers.CVEPModelTRCAGoldCodes method) (medusa.bci.cvep_spellers.CVEPSpellerModel method) (medusa.bci.cvep_spellers.TRCAGoldCodesClassifier method) (medusa.bci.erp_spellers.CMDModelEEGInception method) (medusa.bci.erp_spellers.CMDModelEEGNet method) (medusa.bci.erp_spellers.CMDModelRLDA method) (medusa.bci.erp_spellers.CSDModelEEGInception method) (medusa.bci.erp_spellers.ERPSpellerModel method) (medusa.bci.mi_paradigms.CSPFeatureExtraction method) (medusa.bci.mi_paradigms.MIModel method) (medusa.bci.mi_paradigms.MIModelCSP method) (medusa.bci.mi_paradigms.MIModelEEGSym method) (medusa.bci.ssvep_spellers.SSVEPSpellerModel method) fit_lp() (medusa.spatial_filtering.LaplacianFilter method) fit_signal() (medusa.bci.mi_paradigms.CSPFeatureExtraction method) fit_transform() (medusa.artifact_removal.ArtifactRegression method) (medusa.frequency_filtering.FIRFilter method) (medusa.frequency_filtering.IIRFilter method) fit_transform_dataset() (medusa.bci.cvep_spellers.FilterBankPreprocessing method) (medusa.bci.cvep_spellers.StandardPreprocessing method) (medusa.bci.erp_spellers.StandardPreprocessing method) (medusa.bci.mi_paradigms.CSPFeatureExtraction method) (medusa.bci.mi_paradigms.StandardPreprocessing method) (medusa.bci.ssvep_spellers.StandardPreprocessing method)

fit_transform_signal() (medusa.bci.cvep_spellers.FilterBankPreprocessing method) (medusa.bci.cvep_spellers.StandardPreprocessing method) (medusa.bci.erp_spellers.StandardPreprocessing method) (medusa.bci.mi_paradigms.CSPFeatureExtraction method) (medusa.bci.mi_paradigms.StandardPreprocessing method) (medusa.bci.ssvep_spellers.StandardPreprocessing method) from_dict() (medusa.components.PipelineConnector static method) (medusa.spatial_filtering.CCA static method) (medusa.spatial_filtering.CSP static method) from_pickleable_obj() (medusa.components.Algorithm class method) (medusa.components.PickleableComponent class method) (medusa.components.ProcessingMethod class method) from_serializable_obj() (medusa.artifact_removal.ICAData class method) (medusa.bci.cvep_spellers.CVEPSpellerData class method) (medusa.bci.erp_spellers.ERPSpellerData class method) (medusa.bci.mi_paradigms.MIData class method) (medusa.bci.ssvep_spellers.SSVEPSpellerData class method) (medusa.components.BiosignalData class method) (medusa.components.ConsistencyChecker class method) (medusa.components.CustomBiosignalData class method) (medusa.components.CustomExperimentData class method) (medusa.components.ExperimentData class method) (medusa.components.Recording class method) (medusa.components.SerializableComponent class method) (medusa.components.SettingsTreeItem class method) (medusa.ecg.ECG class method) (medusa.ecg.ECGChannelSet class method) (medusa.emg.EMG class method) (medusa.eog.EOG class method) (medusa.meeg.meeg.EEG class method) (medusa.meeg.meeg.EEGChannelSet class method) (medusa.meeg.meeg.MEEGChannel class method) (medusa.meeg.meeg.MEG class method) (medusa.meeg.meeg.MEGChannelSet class method) (medusa.nirs.NIRS class method) from_standard_set() (medusa.meeg.meeg.MEEGChannel class method)

G

generate_bit_wise_onsets() (medusa.bci.cvep_spellers.BWRFeatureExtraction static method) generate_seq() (medusa.bci.ssvep_spellers.SSVEPCodeGenerator method) get_batches_associated_to_cmd() (medusa.bci.erp_spellers.ERPSpellerData method) get_best_hyparams() (medusa.optimization.Optimizer method) get_biosignals_with_class_name() (medusa.components.Recording method) get_cha_idx_from_labels() (medusa.ecg.ECGChannelSet method) (medusa.meeg.meeg.EEGChannelSet method) get_chunk() (medusa.signal_generators.SignalGenerator method) (medusa.signal_generators.SinusoidalSignalGenerator method) get_components() (medusa.artifact_removal.ICA method) get_confusion_matrix_stats() (in module medusa.stats) get_control_data() (medusa.bci.erp_spellers.ERPSpellerModel static method) (medusa.bci.ssvep_spellers.SSVEPSpellerModel static method) get_epochs() (in module medusa.epoching) get_epochs_of_events() (in module medusa.epoching) get_experiments_with_class_name() (medusa.components.Recording method) get_exposed_methods() (medusa.components.ProcessingMethod method)

get_hyparams() (medusa.optimization.Grinder method) get_inst() (medusa.components.Algorithm method) get_items_by_sorted_sequences() (in module medusa.bci.cvep_spellers) get_nearest_idx() (in module medusa.epoching) get_paradigm_conf_for_freq_enc() (medusa.bci.ssvep_spellers.SSVEPSpellerData static method) get_paradigm_conf_for_hox() (medusa.bci.erp_spellers.ERPSpellerData static method) get_paradigm_conf_for_rcp() (medusa.bci.erp_spellers.ERPSpellerData static method) get_selected_commands_info() (in module medusa.bci.erp_spellers) (in module medusa.bci.ssvep_spellers) get_sources() (medusa.artifact_removal.ICA method) get_standard_montage() (in module medusa.ecg) (in module medusa.meeg.meeg_montages) get_stim_times_to_test() (medusa.bci.ssvep_spellers.CMDModelCCA method) get_torch_device() (in module medusa.pytorch_integration) get_unique_sequences_from_targets() (in module medusa.bci.cvep_spellers) GOLD_CODES (class in medusa.bci.cvep_spellers) gold_codes() (medusa.bci.cvep_spellers.GOLD_CODES static method) Grinder (class in medusa.optimization)

I

ICA (class in medusa.artifact_removal) ICAData (class in medusa.artifact_removal) IIRFilter (class in medusa.frequency_filtering)

input() (medusa.components.Pipeline method) is_tree() (medusa.components.SettingsTreeItem method) itr() (in module medusa.bci.metrics)

J

join() (medusa.components.ThreadWithReturnValue method)

K

k_fold_split() (in module medusa.classification_utils)

L

LaplacianFilter (class in medusa.spatial_filtering) lempelziv_complexity() (in module medusa.local_activation.nonlinear_parameters) LFSR (class in medusa.bci.cvep_spellers) lfsr() (medusa.bci.cvep_spellers.LFSR static method) load() (medusa.artifact_removal.ICA method) (medusa.components.PickleableComponent class method) (medusa.components.SerializableComponent class method)

load_from_bson() (medusa.components.SerializableComponent class method) load_from_json() (medusa.components.SerializableComponent class method) load_from_mat() (medusa.components.SerializableComponent class method) load_from_pickle() (medusa.components.SerializableComponent class method) load_meg_signal_from_spm_file() (medusa.meeg.meeg.MEG static method)

M

median_frequency() (in module medusa.local_activation.spectral_parameteres) medusa module medusa.analysis module medusa.analysis.time_plot module medusa.artifact_removal module medusa.bci module medusa.bci.cvep_spellers module medusa.bci.erp_spellers module medusa.bci.metrics module medusa.bci.mi_paradigms module medusa.bci.ssvep_spellers module medusa.classification_utils module medusa.components module medusa.connectivity module medusa.connectivity.frequency_connectivity module medusa.ecg module medusa.emg module medusa.eog module medusa.epoching module medusa.frequency_filtering module medusa.graph_theory module medusa.graph_theory.assortativity module medusa.graph_theory.betweeenness_centrality module medusa.graph_theory.clustering_coefficient module medusa.graph_theory.complexity module medusa.graph_theory.degree module medusa.graph_theory.density module medusa.graph_theory.efficiency module medusa.graph_theory.eigen_centrality module medusa.graph_theory.modularity module medusa.graph_theory.participation_coefficient module medusa.graph_theory.path_length module medusa.graph_theory.surrogate_graph module medusa.graph_theory.transitivity module medusa.local_activation module medusa.local_activation.nonlinear_parameters module medusa.local_activation.spectral_parameteres module medusa.local_activation.statistics module medusa.meeg module medusa.meeg.meeg module medusa.meeg.meeg_montages module medusa.nirs module medusa.notify_me module medusa.optimization module medusa.performance_analysis module medusa.plots module medusa.plots.erp_plots module

medusa.plots.generic_plots module medusa.plots.head_plots module medusa.plots.mi_plots module medusa.plots.optimal_subplots module medusa.plots.timeplot module medusa.pytorch_integration module medusa.signal_generators module medusa.signal_orthogonalization module medusa.spatial_filtering module medusa.stats module medusa.utils module MEEGChannel (class in medusa.meeg.meeg) MEG (class in medusa.meeg.meeg) MEGChannelSet (class in medusa.meeg.meeg) MIData (class in medusa.bci.mi_paradigms) MIDataset (class in medusa.bci.mi_paradigms) MIModel (class in medusa.bci.mi_paradigms) MIModelCSP (class in medusa.bci.mi_paradigms) MIModelEEGSym (class in medusa.bci.mi_paradigms) MIPlots (class in medusa.plots.mi_plots) modularity() (in module medusa.graph_theory.modularity) module medusa medusa.analysis medusa.analysis.time_plot medusa.artifact_removal medusa.bci medusa.bci.cvep_spellers medusa.bci.erp_spellers medusa.bci.metrics medusa.bci.mi_paradigms medusa.bci.ssvep_spellers medusa.classification_utils medusa.components medusa.connectivity medusa.connectivity.frequency_connectivity medusa.ecg medusa.emg medusa.eog medusa.epoching medusa.frequency_filtering medusa.graph_theory medusa.graph_theory.assortativity medusa.graph_theory.betweeenness_centrality medusa.graph_theory.clustering_coefficient medusa.graph_theory.complexity medusa.graph_theory.degree medusa.graph_theory.density medusa.graph_theory.efficiency medusa.graph_theory.eigen_centrality medusa.graph_theory.modularity medusa.graph_theory.participation_coefficient medusa.graph_theory.path_length medusa.graph_theory.surrogate_graph medusa.graph_theory.transitivity medusa.local_activation medusa.local_activation.nonlinear_parameters medusa.local_activation.spectral_parameteres medusa.local_activation.statistics medusa.meeg medusa.meeg.meeg medusa.meeg.meeg_montages medusa.nirs medusa.notify_me medusa.optimization medusa.performance_analysis medusa.plots medusa.plots.erp_plots medusa.plots.generic_plots medusa.plots.head_plots medusa.plots.mi_plots medusa.plots.optimal_subplots medusa.plots.timeplot medusa.pytorch_integration medusa.signal_generators medusa.signal_orthogonalization medusa.spatial_filtering medusa.stats medusa.utils multiscale_entropy() (in module medusa.local_activation.nonlinear_parameters) multiscale_lempelziv_complexity() (in module medusa.local_activation.nonlinear_parameters) must_stop() (medusa.bci.cvep_spellers.CVEPModelTRCAGoldCodes method)

N

NIRS (class in medusa.nirs) NoGPUError

normalize_epochs() (in module medusa.epoching) notify_me() (in module medusa.notify_me)

O

one_hot_labels() (in module medusa.classification_utils) optimal_subplot_row_col() (in module medusa.plots.optimal_subplots)

optimize() (medusa.optimization.Optimizer method) Optimizer (class in medusa.optimization)

P

participation_coefficient() (in module medusa.graph_theory.participation_coefficient) path_length() (in module medusa.graph_theory.path_length) patterns (medusa.spatial_filtering.CSP attribute), [1] perf_analysis() (in module medusa.performance_analysis) PickleableComponent (class in medusa.components) Pipeline (class in medusa.components) PipelineConnector (class in medusa.components) plot() (medusa.spatial_filtering.CSP method) plot_components() (medusa.artifact_removal.ICA method) plot_erd_ers_freq() (in module medusa.plots.mi_plots) (medusa.plots.mi_plots.MIPlots method) plot_erd_ers_r2_topo() (medusa.plots.mi_plots.MIPlots method) plot_erd_ers_time() (in module medusa.plots.mi_plots) (medusa.plots.mi_plots.MIPlots method) plot_erp() (in module medusa.plots.erp_plots) plot_erp_from_erp_speller_dataset() (in module medusa.plots.erp_plots) plot_head() (in module medusa.plots.head_plots) plot_r2_topoplot() (in module medusa.plots.mi_plots) plot_sources() (medusa.artifact_removal.ICA method) plot_spectrogram() (medusa.plots.mi_plots.MIPlots method) plot_summary() (medusa.artifact_removal.ICA method) predict() (medusa.bci.cvep_spellers.CircularShiftingAsyncESExtension method) (medusa.bci.cvep_spellers.CircularShiftingClassifier method) (medusa.bci.cvep_spellers.CMDModelBWREEGInception method) (medusa.bci.cvep_spellers.CMDModelBWRLDA method) (medusa.bci.cvep_spellers.CVEPModelCircularShifting method) (medusa.bci.cvep_spellers.CVEPModelTRCAGoldCodes method) (medusa.bci.cvep_spellers.CVEPSpellerModel method) (medusa.bci.cvep_spellers.TRCAGoldCodesClassifier method) (medusa.bci.erp_spellers.CMDModelEEGInception method) (medusa.bci.erp_spellers.CMDModelEEGNet method) (medusa.bci.erp_spellers.CMDModelRLDA method) (medusa.bci.erp_spellers.CSDModelEEGInception method) (medusa.bci.erp_spellers.ERPSpellerModel method) (medusa.bci.mi_paradigms.MIModel method) (medusa.bci.mi_paradigms.MIModelCSP method) (medusa.bci.mi_paradigms.MIModelEEGSym method) (medusa.bci.ssvep_spellers.CMDModelCCA method) (medusa.bci.ssvep_spellers.SSVEPSpellerModel method)

predict_cycles() (medusa.bci.cvep_spellers.CircularShiftingClassifier method) predict_dataset() (medusa.bci.cvep_spellers.CircularShiftingAsyncESExtension method) (medusa.bci.cvep_spellers.CircularShiftingClassifier method) (medusa.bci.cvep_spellers.CMDModelBWREEGInception method) (medusa.bci.cvep_spellers.CMDModelBWRLDA method) (medusa.bci.cvep_spellers.CVEPModelCircularShifting method) (medusa.bci.cvep_spellers.CVEPModelTRCAGoldCodes method) (medusa.bci.cvep_spellers.CVEPSpellerModel method) (medusa.bci.cvep_spellers.TRCAGoldCodesClassifier method) (medusa.bci.mi_paradigms.MIModelCSP method) (medusa.bci.mi_paradigms.MIModelEEGSym method) (medusa.bci.ssvep_spellers.CMDModelCCA method) predict_dataset_earlystopping() (medusa.bci.cvep_spellers.CVEPModelCircularShifting method) predict_earlystopping() (medusa.bci.cvep_spellers.CVEPModelCircularShifting method) print_device_info() (in module medusa.pytorch_integration) ProcessingClassWrapper (class in medusa.components) ProcessingFuncWrapper (class in medusa.components) ProcessingMethod (class in medusa.components) project() (medusa.spatial_filtering.CCA method) (medusa.spatial_filtering.CSP method) (medusa.spatial_filtering.TRCA method)

R

r (medusa.spatial_filtering.CCA attribute) read_montage_file() (in module medusa.meeg.meeg_montages) rebuild() (medusa.artifact_removal.ICA method) Recording (class in medusa.components)

reject_noisy_epochs() (in module medusa.artifact_removal) rename_attribute() (medusa.components.Recording method) resample_epochs() (in module medusa.epoching) run() (medusa.components.ThreadWithReturnValue method)

S

sample_entropy() (in module medusa.local_activation.nonlinear_parameters) save() (medusa.artifact_removal.ICA method) (medusa.components.PickleableComponent method) (medusa.components.SerializableComponent method) save_to_bson() (medusa.components.SerializableComponent method) save_to_json() (medusa.components.SerializableComponent method) save_to_mat() (medusa.components.SerializableComponent method) save_to_pickle() (medusa.components.SerializableComponent method) sel_eigenvalues (medusa.spatial_filtering.CSP attribute) sel_filters (medusa.spatial_filtering.CSP attribute) sel_idxs (medusa.spatial_filtering.CSP attribute) sel_patterns (medusa.spatial_filtering.CSP attribute) SerializableComponent (class in medusa.components) set_bayes_opt_params() (medusa.optimization.Optimizer method) set_data() (medusa.components.SettingsTreeItem method) set_dataset() (medusa.plots.mi_plots.MIPlots method) set_ground() (medusa.ecg.ECGChannelSet method) (medusa.meeg.meeg.EEGChannelSet method) set_montage() (medusa.ecg.ECGChannelSet method) (medusa.meeg.meeg.EEGChannelSet method) set_sizes() (medusa.plots.mi_plots.MIPlots method) set_standard_montage() (medusa.ecg.ECGChannelSet method) (medusa.meeg.meeg.EEGChannelSet method) SettingsTreeItem (class in medusa.components) shaded_plot() (in module medusa.plots.generic_plots)

shannon_spectral_entropy() (in module medusa.local_activation.spectral_parameteres) show_exclusion() (medusa.artifact_removal.ICA method) signal_orthogonalization_cpu() (in module medusa.signal_orthogonalization) signal_orthogonalization_gpu() (in module medusa.signal_orthogonalization) signal_orthogonalization_gpu_old() (in module medusa.signal_orthogonalization) SignalGenerator (class in medusa.signal_generators) signed_r2() (in module medusa.local_activation.statistics) SinusoidalSignalGenerator (class in medusa.signal_generators) sort_nearest_channels() (medusa.meeg.meeg.EEGChannelSet method) split_erp_features() (in module medusa.bci.erp_spellers) SSVEPCodeGenerator (class in medusa.bci.ssvep_spellers) SSVEPSpellerData (class in medusa.bci.ssvep_spellers) SSVEPSpellerDataset (class in medusa.bci.ssvep_spellers) SSVEPSpellerModel (class in medusa.bci.ssvep_spellers) StandardFeatureExtraction (class in medusa.bci.erp_spellers) (class in medusa.bci.mi_paradigms) (class in medusa.bci.ssvep_spellers) StandardPreprocessing (class in medusa.bci.cvep_spellers) (class in medusa.bci.erp_spellers) (class in medusa.bci.mi_paradigms) (class in medusa.bci.ssvep_spellers) subset() (medusa.ecg.ECGChannelSet method) (medusa.meeg.meeg.EEGChannelSet method) surrogate_graph() (in module medusa.graph_theory.surrogate_graph) switch_coordinates_system() (in module medusa.meeg.meeg_montages)

T

ThreadWithReturnValue (class in medusa.components) time_plot() (in module medusa.plots.timeplot) time_to_sample_index_events() (in module medusa.epoching) to_dict() (medusa.components.PipelineConnector method) (medusa.components.TreeDict method) (medusa.spatial_filtering.CCA method) (medusa.spatial_filtering.CSP method) to_pickleable_obj() (medusa.components.Algorithm method) (medusa.components.PickleableComponent method) (medusa.components.ProcessingClassWrapper method) (medusa.components.ProcessingMethod method) to_serializable_obj() (medusa.artifact_removal.ICAData method) (medusa.bci.cvep_spellers.CVEPSpellerData method) (medusa.bci.erp_spellers.ERPSpellerData method) (medusa.bci.mi_paradigms.MIData method) (medusa.bci.ssvep_spellers.SSVEPSpellerData method) (medusa.components.BiosignalData method) (medusa.components.ConsistencyChecker method) (medusa.components.CustomBiosignalData method) (medusa.components.CustomExperimentData method) (medusa.components.ExperimentData method) (medusa.components.Recording method) (medusa.components.SerializableComponent method) (medusa.components.SettingsTreeItem method) (medusa.ecg.ECG method) (medusa.ecg.ECGChannelSet method) (medusa.emg.EMG method) (medusa.eog.EOG method) (medusa.meeg.meeg.EEG method) (medusa.meeg.meeg.EEGChannelSet method) (medusa.meeg.meeg.MEEGChannel method) (medusa.meeg.meeg.MEG method) (medusa.meeg.meeg.MEGChannelSet method) (medusa.nirs.NIRS method)

TopographicPlot (class in medusa.plots.head_plots) TorchExtrasNotInstalled TorchNotConfiguredError transform() (medusa.artifact_removal.ArtifactRegression method) (medusa.frequency_filtering.FIRFilter method) (medusa.frequency_filtering.IIRFilter method) transform_dataset() (medusa.bci.cvep_spellers.BWRFeatureExtraction method) (medusa.bci.cvep_spellers.FilterBankPreprocessing method) (medusa.bci.cvep_spellers.StandardPreprocessing method) (medusa.bci.erp_spellers.StandardFeatureExtraction method) (medusa.bci.mi_paradigms.CSPFeatureExtraction method) (medusa.bci.mi_paradigms.StandardFeatureExtraction method) (medusa.bci.mi_paradigms.StandardPreprocessing method) (medusa.bci.ssvep_spellers.StandardFeatureExtraction method) transform_signal() (medusa.bci.cvep_spellers.BWRFeatureExtraction method) (medusa.bci.cvep_spellers.FilterBankPreprocessing method) (medusa.bci.cvep_spellers.StandardPreprocessing method) (medusa.bci.erp_spellers.StandardFeatureExtraction method) (medusa.bci.erp_spellers.StandardPreprocessing method) (medusa.bci.mi_paradigms.CSPFeatureExtraction method) (medusa.bci.mi_paradigms.StandardFeatureExtraction method) (medusa.bci.mi_paradigms.StandardPreprocessing method) (medusa.bci.ssvep_spellers.StandardFeatureExtraction method) (medusa.bci.ssvep_spellers.StandardPreprocessing method) transitivity() (in module medusa.graph_theory.transitivity) TRCA (class in medusa.spatial_filtering) trca() (medusa.spatial_filtering.TRCA static method) TRCAGoldCodesClassifier (class in medusa.bci.cvep_spellers) TreeDict (class in medusa.components)

U

UnknownStandardChannel UnlocatedChannel, [1]

update() (medusa.plots.head_plots.ConnectivityPlot method) (medusa.plots.head_plots.TopographicPlot method)

V

validate_default_value() (medusa.components.CheckTreeStructure method) validate_info() (medusa.components.CheckTreeStructure method)

validate_input_format() (medusa.components.CheckTreeStructure method) validate_value_options() (medusa.components.CheckTreeStructure method) validate_value_range() (medusa.components.CheckTreeStructure method)

W

w (medusa.spatial_filtering.TRCA attribute) warn_gpu_not_available() (in module medusa.pytorch_integration)

wx (medusa.spatial_filtering.CCA attribute) wy (medusa.spatial_filtering.CCA attribute)